Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810839.1_cds_XP_016496385.1_10615
CDS Infomation

[gene=LOC107815334] [db_xref=GeneID:107815334] [protein=threonine dehydratase biosynthetic, chloroplastic-like] [protein_id=XP_016496385.1] [location=join(96427..96858,97677..97856,97961..98437,99114..99362,99451..99524,99686..99803,99989..100123,100241..100381)] [gbkey=CDS]
Sequence

ATGGATGTTCTCCGTTTTAATTCCGTAAAGCCACGCAATTTCCACTTCCCTCCCAAATCC
ACGTCGGGCACAGCCTTTATTACGGTTACCTCCGATGCCGTGAAACCCGCCGCCACGAGG
AAAACAAAAAAGCCGGGGATCAAACCTCCGGCGGCACTTATAGCGGAGAAACCATTGGAG
ATTTCACCGTTACAGGCACCCGCGTCTGTTTCAGATACATTGCTACCAGTAGTACACCCG
AGTTCGTTACAATGCGAGCCAGGGTATTTGATACCGAATTATCCACGTGGTAATATCGGC
TACAAGTACCTGAAAGAAATATTGACATCAAAAGTGTATGAGGTAGCTGATGAGACGCCT
CTGCAGCTTGCACCTAAGCTTTCAGAGAGGTTAGGGGTAAATTTGTGGCTCAAAAGAGAG
GATCTACAGCCGGTCTTCTCATTCAAGGTCAGAGGATCTTACCATATGATGGCAAAGCTC
CCTAAGGAGCTGTTAGAAAAGGGGGTTATATGCTCATCAGCTGGAAATCATGCACAAGGT
GTTGCATTAGCTGCCCAGAGACTTGGTTGCAATGCTGTGATTGTGATGCCTGTTACTACA
CCCGAAATTAAATGGAAATCAGTTGAGAGATTGGGTGCTACTGTTATTCGCAAGGGGGAC
ACATATGATGAGGCTCAAGCATATGCGAAAGCTCAGGCCAAAGCAGAAGGCCGCACATTC
GTCCCTCCTTTTGATCACCCAGATATTATAATAGGACAAGGTACAGTTGGAATGGAGATT
AGTCGCCAATTCAAGGATGACATACACGCAATATTTGTACCAGTTGGTGGAGGGGGTCTT
ATAGCTGGAATTGCAGCCTATCTGAAAAAAGTTTCCCCTGATATAAAGATTATCGGTGTT
GAGCCATTCGATTCAAATGCAATGGCATTGTCTTTGCACCATGGTCGAAGAATAATGCTG
GAACAAGTTGGAGGTTTTGCAGATGCTGTAGCTATTAAAGTGATGGGAGAAGAAACTTTC
CGTCTCTGCAGGGAATTATTAGATGGGGTGGTCCTAGTTGGTCGTGATGCTATATGTGCA
TCGATAAAGGACATGTTTGAAGAGAAAAGAAGCATACTGGAGCCTGCAGGTGCACTTGCT
CTTGCTGGAGCAGAAGCGTATTGTAAGTATTATGGCCTGAAGGGTGAAAACATAGTAGCA
ATAACTAGTGGAGCCAATATGAATTTTGACAGACTTAGATTGGTAACTGAACTCGCGGAT
GTTGGTAGGCAGCTGGAAGCTGTTCTCGCTACTTATATGCCCGAACAGCCAGGGAGCTTC
AGAAAGTTCTATAAGATGGTGGGAAGGATGAATCTTACTGAATTGAAGTACAGATATAAT
TCTGAGAAAGAAAAAGCTAGAGTACTTTACAGAGTTGGTCTTCACACTAAATTAGAACTT
GAAGAAATGGTGGACAGGATGGAATCATCACAACTGCATACCATTAATTTTACAGATAAC
GAATTGGTCAAAGATCATCTAAGGCATCTGATGGGTTGCAGATCAACTGTTCACAATGAG
CTTCTCTGTCGATTCATTTTTCCCGAGAGGCCTGGTGCTTTGATGAAGTTTTTAGATGCT
TTTAGCCCTCGTTGGAATATTAGTTTGTTCCACTACCGTGCACAGGGAGAAACTGGTGCA
AATGTGTTAATCGGCATCCAAGTTCCACAGAGTGAGGTCGATGAGTTCAGGGCACGAGCT
GACACTCTTGGTTATGAATATGTATTGGAGACTCTCAATGAGGCTTTCCAGTTACTAATG
CATTGA

Peptide Sequence

PEP ID

XP_016496385.1
PEP Infomation

PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Nicotiana tabacum]
Sequence

MDVLRFNSVKPRNFHFPPKSTSGTAFITVTSDAVKPAATRKTKKPGIKPPAALIAEKPLE
ISPLQAPASVSDTLLPVVHPSSLQCEPGYLIPNYPRGNIGYKYLKEILTSKVYEVADETP
LQLAPKLSERLGVNLWLKREDLQPVFSFKVRGSYHMMAKLPKELLEKGVICSSAGNHAQG
VALAAQRLGCNAVIVMPVTTPEIKWKSVERLGATVIRKGDTYDEAQAYAKAQAKAEGRTF
VPPFDHPDIIIGQGTVGMEISRQFKDDIHAIFVPVGGGGLIAGIAAYLKKVSPDIKIIGV
EPFDSNAMALSLHHGRRIMLEQVGGFADAVAIKVMGEETFRLCRELLDGVVLVGRDAICA
SIKDMFEEKRSILEPAGALALAGAEAYCKYYGLKGENIVAITSGANMNFDRLRLVTELAD
VGRQLEAVLATYMPEQPGSFRKFYKMVGRMNLTELKYRYNSEKEKARVLYRVGLHTKLEL
EEMVDRMESSQLHTINFTDNELVKDHLRHLMGCRSTVHNELLCRFIFPERPGALMKFLDA
FSPRWNISLFHYRAQGETGANVLIGIQVPQSEVDEFRARADTLGYEYVLETLNEAFQLLM
H

Transcript Sequence

Gene sequence data has not been registered.